NEGR1-IT1

associated omics data
NEGR1 intronic transcript 1Genealiases: []

Q-omics provides the consensus-scored NEGR1-IT1 profile across patient tissues and cancer cell-line models. NEGR1-IT1 expression is associated with patient survival in 7 of 34 cancer types, with the highest sampling consensus in CESC. Among the 18 cancer types available for tumor–normal comparison, NEGR1-IT1 is differentially expressed in 1, with the highest sampling consensus in KIRC. Additionally, NEGR1-IT1 RNA expression shows 8,753 significant gene co-expression associations, with the highest sampling consensus in COAD. Together, these results highlight CESC, KIRC, and COAD as cancer lineages where NEGR1-IT1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes NEGR1-IT1 survival associations across molecular data types. NEGR1-IT1 RNA expression shows survival associations in the most cancer types (7). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
NEGR1-IT1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier7CESC (90)view →
This table ranks reproducible NEGR1-IT1 RNA expression–survival associations across cancer types. High NEGR1-IT1 expression shows unfavorable associations in CESC, BRCA, SKCM, KIRP, LUAD and PCPG. The CESC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify CESC as the clearest survival context for NEGR1-IT1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
CESCOSTertileAll0.2520.800<.00190view →
BRCAOSTertileAll0.3420.584<.00172view →
SKCMDFSTertileII,III,IV0.2710.694<.00163view →
KIRPOSTertileIII,IV0.2840.822<.00145view →
LUADDFSTertileIV0.3420.893<.00118view →
PCPGOSTertileAll0.7620.974.00418view →
Pink = unfavorable, green = favorable. all 7 lineages →

NEGR1-IT1-CESC (OS)

Kaplan–Meier survival curve for NEGR1-IT1 RNA expression in CESC: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes NEGR1-IT1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 1. The strongest signals are observed in KIRC for RNA.
NEGR1-IT1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot1KIRC (1)view →
This table ranks reproducible tumor–normal expression differences for NEGR1-IT1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. NEGR1-IT1 shows lower tumor expression in KIRC. The KIRC box plot shows higher NEGR1-IT1 RNA expression in normal versus tumor tissue (log2 FC = −0.021, t-test p = .018).
LineageGenderStageFold-changepSampling consensus
KIRCMaleAll−0.021.0181view →
Green = repressed in tumor. all 1 lineages →

NEGR1-IT1-KIRC

Tumor-vs-normal expression box plot for NEGR1-IT1 in KIRC.

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Cross-omics associations

This table shows molecular features associated with NEGR1-IT1 in patient tissues and cancer cell lines. In patient samples, NEGR1-IT1 shows the broadest associations at the RNA and protein expression levels, with COAD recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA8,753COAD (4907)view →
Function (RNA)5,913STAD (5703)view →