NDUFAF4

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, NDUFAF4 mutation is significantly associated with the RNA expression of many other genes, with 13 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible NDUFAF4-associated genes across cancer lineages are LIM2, USP26, and LCE1C. Each is linked with NDUFAF4 in more than 1 cancer types. Because this analysis shows association rather than direction, both NDUFAF4-to-partner and partner-to-NDUFAF4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LIM2 grouped by NDUFAF4-low versus NDUFAF4-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NDUFAF4→partner) and Y-score (partner→NDUFAF4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaLIM2 →+0.035+5.201<.001.00631
BLOOD_LeukemiaUSP26 →+0.036+5.201<.001.00631
BLOOD_LeukemiaLCE1C →+0.432+4.922.002.00931
BLOOD_LeukemiaPAGE3 →+0.110+5.969<.001.00131
BLOOD_LeukemiaSLC5A8 →+0.182+5.201<.001.00631
BLOOD_LeukemiaTEX13A →+0.062+5.969<.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 13 associations by consensus.

LIM2 by NDUFAF4 expression — BLOOD_Leukemia

Box plot of LIM2 in NDUFAF4-low vs NDUFAF4-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration