NDNF

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, NDNF mutation is significantly associated with the total protein of many other genes, with 62 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible NDNF-associated genes across cancer lineages are 4E-BP1, Cyclin-B1, and 14-3-3_beta. Each is linked with NDNF in more than 2 cancer types. Because this analysis shows association rather than direction, both NDNF-to-partner and partner-to-NDNF results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, 4E-BP1 grouped by NDNF-low versus NDNF-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NDNF→partner) and Y-score (partner→NDNF) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCEC4E-BP1 →+0.365+2.117<.001.00233
UCECCyclin-B1 →+0.685+3.906<.001<.00133
UCEC14-3-3_beta →-0.093-2.295.003.00532
UCECHER2_pY1248 →-0.177-2.115.035<.00132
UCECACVRL1 →-0.108-1.395.012.04332
UCECJNK_pT183_Y185 →-0.202-2.662<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 62 associations by consensus.

4E-BP1 by NDNF expression — UCEC

Box plot of 4E-BP1 in NDNF-low vs NDNF-high samples in UCEC.

Explore this box plot interactively →

Exploration