MSANTD4

Across TCGA patient cohorts, MSANTD4 mutation is significantly associated with the RNA expression of many other genes, with 2,323 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible MSANTD4-associated genes across cancer lineages are MIR548AI, IGHVII-1-1, and RN7SL98P. Each is linked with MSANTD4 in more than 1 cancer types. Because this analysis shows association rather than direction, both MSANTD4-to-partner and partner-to-MSANTD4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR548AI grouped by MSANTD4-low versus MSANTD4-high in PRAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MSANTD4→partner) and Y-score (partner→MSANTD4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
PRAD	MIR548AI →	+0.683	+7.939	<.001	.008	3	2
BLCA	IGHVII-1-1 →	+0.179	+7.640	<.001	.009	3	2
UCEC	RN7SL98P →	+0.077	+1.845	.005	.009	3	2
UCEC	RNA5SP410 →	+0.617	+2.204	<.001	<.001	3	2
BLCA	RNU6-656P →	+0.283	+7.640	<.001	.009	3	2
LUSC	OR6C3 →	+0.133	+5.334	<.001	<.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,323 associations by consensus.

MIR548AI by MSANTD4 expression — PRAD

Explore this box plot interactively →