METTL2A

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, METTL2A mutation is significantly associated with the RNA expression of many other genes, with 2,491 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible METTL2A-associated genes across cancer lineages are IGKV2D-19, MIR4802, and RNU6-1292P. Each is linked with METTL2A in more than 1 cancer types. Because this analysis shows association rather than direction, both METTL2A-to-partner and partner-to-METTL2A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, IGKV2D-19 grouped by METTL2A-low versus METTL2A-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (METTL2A→partner) and Y-score (partner→METTL2A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCAIGKV2D-19 →+0.258+4.899<.001.00532
COADMIR4802 →+1.372+4.446<.001.00632
UCECRNU6-1292P →+0.252+3.132<.001.00532
BLCAVDAC2P2 →+0.079+4.178<.001.00931
BLCAMIR3667 →+0.692+4.299<.001.00731
UCECDYNLL2 →+0.488+2.823.002.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,491 associations by consensus.

IGKV2D-19 by METTL2A expression — BLCA

Box plot of IGKV2D-19 in METTL2A-low vs METTL2A-high samples in BLCA.

Explore this box plot interactively →

Exploration