IGKV2D-19

associated omics data
immunoglobulin kappa variable 2D-19 (pseudogene)Genealiases: A12 · IGKV2D19

Q-omics provides the consensus-scored IGKV2D-19 profile across patient tissues and cancer cell-line models. IGKV2D-19 expression is associated with patient survival in 9 of 34 cancer types, with the highest sampling consensus in KICH. Among the 18 cancer types available for tumor–normal comparison, IGKV2D-19 is differentially expressed in 2, with the highest sampling consensus in LUAD. Additionally, IGKV2D-19 RNA expression shows 6,426 significant pathway-activity associations, with the highest sampling consensus in STAD. Together, these results highlight KICH, LUAD, and STAD as cancer lineages where IGKV2D-19 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes IGKV2D-19 survival associations across molecular data types. IGKV2D-19 RNA expression shows survival associations in the most cancer types (9). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
IGKV2D-19 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier9KICH (90)view →
This table ranks reproducible IGKV2D-19 RNA expression–survival associations across cancer types. High IGKV2D-19 expression shows unfavorable associations in KICH, KIRP, SKCM, READ, ESCA and COAD. The KICH Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify KICH as the clearest survival context for IGKV2D-19 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KICHDFSTertileAll0.0810.904<.00190view →
KIRPOSTertileAll0.3050.726<.00163view →
SKCMOSTertileII,III,IV0.1750.739<.00136view →
READOSTertileAll0.2050.693.02927view →
ESCADFSTertileAll0.1480.673.04018view →
COADOSTertileIV0.0560.659.00218view →
Pink = unfavorable, green = favorable. all 9 lineages →

IGKV2D-19-KICH (DFS)

Kaplan–Meier survival curve for IGKV2D-19 RNA expression in KICH: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes IGKV2D-19 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 2. The strongest signals are observed in LUAD for RNA.
IGKV2D-19 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot2LUAD (2)view →
This table ranks reproducible tumor–normal expression differences for IGKV2D-19. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. IGKV2D-19 shows higher tumor expression in LUAD and LUSC. The LUAD box plot shows higher IGKV2D-19 RNA expression in tumor versus normal tissue (log2 FC = +0.059, t-test p = .008).
LineageGenderStageFold-changepSampling consensus
LUADAllAll+0.059.0082view →
LUSCMaleAll+0.028.0411view →
Green = repressed in tumor. all 2 lineages →

IGKV2D-19-LUAD

Tumor-vs-normal expression box plot for IGKV2D-19 in LUAD.

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Cross-omics associations

This table shows molecular features associated with IGKV2D-19 in patient tissues and cancer cell lines. In patient samples, IGKV2D-19 shows the broadest associations at the RNA and protein expression levels, with STAD recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Function (RNA)6,426STAD (6076)view →
RNA3,880THCA (885)view →