METRN

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, METRN protein abundance is significantly associated with the RNA expression of many other genes, with 2,891 significant associations in total. GBM shows the largest number of these associations.

The most reproducible METRN-associated genes across cancer lineages are ZNF317, TRIM45, and LRRC46. Each is linked with METRN in more than 1 cancer types. Because this analysis shows association rather than direction, both METRN-to-partner and partner-to-METRN results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, METRN versus ZNF317 in PDAC, with a Pearson correlation of -0.88.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (METRN→partner) and Y-score (partner→METRN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACZNF317 →-0.430-0.718.006.00132
PDACTRIM45 →-1.022-0.867.002.00232
PDACLRRC46 →-0.615-0.718.007.00132
PDACSPIN2A →-0.544-0.949<.001<.00132
PDACZNF852 →-0.865-0.787.001.00932
PDACZNF836 →-1.270-0.854.002.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,891 associations by consensus.

METRN vs ZNF317 — PDAC

Per-sample scatter of METRN vs ZNF317 in PDAC (Pearson r = -0.88).

Explore this scatter interactively →

Exploration