MCM3

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MCM3 mutation is significantly associated with the total protein of many other genes, with 48 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible MCM3-associated genes across cancer lineages are FoxM1, Notch1, and p62 Lck ligand. Each is linked with MCM3 in more than 1 cancer types. Because this analysis shows association rather than direction, both MCM3-to-partner and partner-to-MCM3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FoxM1 grouped by MCM3-low versus MCM3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MCM3→partner) and Y-score (partner→MCM3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECFoxM1 →+0.290+1.662.001.01132
UCECNotch1 →+0.200+2.235<.001.00532
UCECp62 Lck ligand →+0.472+2.874<.001<.00132
UCECPCNA →+0.323+2.392<.001<.00132
UCECCaspase-7-cleavedD198 →+0.709+1.604<.001.02132
UCEC14-3-3_beta →-0.087-1.973.014.02931
Each partner links to its Q-omics profile. Showing the 6 strongest of 48 associations by consensus.

FoxM1 by MCM3 expression — UCEC

Box plot of FoxM1 in MCM3-low vs MCM3-high samples in UCEC.

Explore this box plot interactively →

Exploration