LY6G6F-LY6G6D

Across TCGA patient cohorts, LY6G6F-LY6G6D mutation is significantly associated with the immune_cell of many other genes, with 4 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible LY6G6F-LY6G6D-associated genes across cancer lineages are Preadipocytes, aDC, and Eosinophils. Each is linked with LY6G6F-LY6G6D in more than 1 cancer types. Because this analysis shows association rather than direction, both LY6G6F-LY6G6D-to-partner and partner-to-LY6G6F-LY6G6D results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Preadipocytes grouped by LY6G6F-LY6G6D-low versus LY6G6F-LY6G6D-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LY6G6F-LY6G6D→partner) and Y-score (partner→LY6G6F-LY6G6D) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	Preadipocytes →	+0.063	+3.754	<.001	.008	3	2
SKCM	aDC →	-0.120	-2.453	.010	.020	3	1
SKCM	Eosinophils →	+0.064	+2.123	<.001	.030	3	1
BLCA	Plasma cells →	+0.036	+3.154	.015	.024	3	1

Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

Preadipocytes by LY6G6F-LY6G6D expression — COAD

Explore this box plot interactively →