LY6G6F-LY6G6D

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, LY6G6F-LY6G6D RNA differs between tumor and matched normal tissue in 8 of 18 cancer types tested, making tumor–normal expression one of LY6G6F-LY6G6D’s most consistent transcriptional readouts.

The strongest signal is observed in colon adenocarcinoma (COAD), where LY6G6F-LY6G6D RNA is more highly expressed in tumor relative to normal tissue. In most cancer types LY6G6F-LY6G6D is over-expressed in tumor, although a few such as BLCA and LUAD show the opposite, repressed pattern.

COAD, BLCA, and LUAD are the cancer types where LY6G6F-LY6G6D tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in LY6G6F-LY6G6D RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
COADFemaleAll+3.098<.00112view →
BLCAFemaleAll−0.347<.00111view →
LUADFemaleAll−0.069<.0017view →
THCAMaleAll−0.209<.0015view →
HNSCFemaleIII,IV−0.286.0043view →
KIRCAllII,III,IV−0.006.0123view →
PRADAllAll−0.738<.0012view →
READAllAll+1.788.0421view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 8 strongest of 8 lineages.

LY6G6F-LY6G6D–COAD

Tumor-vs-normal expression box plot for LY6G6F-LY6G6D RNA in COAD.

Open the COAD breakdown →

Exploration