LRRD1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LRRD1 mutation is significantly associated with the RNA expression of many other genes, with 2,919 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LRRD1-associated genes across cancer lineages are RN7SL578P, MIR5582, and ALDOA. Each is linked with LRRD1 in more than 1 cancer types. Because this analysis shows association rather than direction, both LRRD1-to-partner and partner-to-LRRD1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL578P grouped by LRRD1-low versus LRRD1-high in READ.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LRRD1→partner) and Y-score (partner→LRRD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
READRN7SL578P →+0.172+5.039<.001.00832
CESCMIR5582 →+0.880+3.783<.001.00532
UCECALDOA →+0.437+2.050<.001<.00132
UCECSLC25A4 →+0.443+1.818<.001<.00132
UCECBAG3 →+0.561+2.321<.001<.00132
UCECCOX11 →+0.352+1.399.003.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,919 associations by consensus.

RN7SL578P by LRRD1 expression — READ

Box plot of RN7SL578P in LRRD1-low vs LRRD1-high samples in READ.

Explore this box plot interactively →

Exploration