LRRC39

Across TCGA patient cohorts, LRRC39 RNA expression is significantly associated with the RNA expression of many other genes, with 19,372 significant associations in total. UVM shows the largest number of these associations.

The most reproducible LRRC39-associated genes across cancer lineages are TRMT13, PNISR, and ARGLU1. Each is linked with LRRC39 in more than 31 cancer types. Because this analysis shows association rather than direction, both LRRC39-to-partner and partner-to-LRRC39 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LRRC39 versus TRMT13 in UVM, with a Pearson correlation of 0.85.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LRRC39→partner) and Y-score (partner→LRRC39) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UVM	TRMT13 →	+1.238	+1.721	<.001	<.001	3	32
UVM	PNISR →	+1.439	+1.558	<.001	<.001	3	31
UVM	ARGLU1 →	+1.616	+1.615	<.001	<.001	3	31
UVM	AHSA2P →	+1.508	+1.603	<.001	<.001	3	31
UVM	PRPF39 →	+1.397	+1.566	<.001	<.001	3	31
UVM	RNPC3 →	+1.007	+1.517	<.001	<.001	3	31

Each partner links to its Q-omics profile. Showing the 6 strongest of 19,372 associations by consensus.

LRRC39 vs TRMT13 — UVM

Explore this scatter interactively →