LRRC39

Across TCGA patient cohorts, LRRC39 protein abundance is significantly associated with the protein abundance of many other proteins, with 569 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible LRRC39-associated proteins across cancer lineages are C4orf54_S1345, CAVIN1_Y156, and COBL_S284. Each is linked with LRRC39 in more than 1 cancer types. Because this analysis shows association rather than direction, both LRRC39-to-partner and partner-to-LRRC39 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LRRC39 versus C4orf54_S1345 in HNSC, with a Pearson correlation of 0.91.

protein abundance associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LRRC39→partner) and Y-score (partner→LRRC39) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	C4orf54_S1345 →	+1.953	+1.062	<.001	.001	3	1
HNSC	CAVIN1_Y156 →	+0.714	+0.658	.002	.002	3	1
HNSC	COBL_S284 →	+2.549	+0.853	.004	.004	3	1
HNSC	CRNN_T257 →	-1.486	-0.796	.003	<.001	3	1
HNSC	AGL_S929 →	+0.628	+0.761	.003	.001	3	1
HNSC	AGL_T193 →	+1.590	+0.853	<.001	.004	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 569 associations by consensus.

LRRC39 vs C4orf54_S1345 — HNSC

Explore this scatter interactively →