LPCAT4

Across TCGA patient cohorts, LPCAT4 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,727 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible LPCAT4-associated proteins across cancer lineages are SLC12A6, SLC12A6_S1032, and CTDSPL2. Each is linked with LPCAT4 in more than 4 cancer types. Because this analysis shows association rather than direction, both LPCAT4-to-partner and partner-to-LPCAT4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LPCAT4 versus SLC12A6 in HNSC, with a Pearson correlation of 0.43.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LPCAT4→partner) and Y-score (partner→LPCAT4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	SLC12A6 →	+0.493	+0.486	<.001	<.001	3	5
HNSC	SLC12A6_S1032 →	+0.674	+0.761	.001	<.001	2	5
GBM	CTDSPL2 →	+0.375	+0.283	.001	.004	3	4
LSCC	IL1RN →	+0.944	+0.438	.001	.008	3	4
CCRCC	ARHGAP9 →	+0.319	+0.241	<.001	.001	3	3
BRCA	PPP2R3A_S614 →	-0.890	-0.788	.004	.004	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,727 associations by consensus.

LPCAT4 vs SLC12A6 — HNSC

Explore this scatter interactively →