LMX1A

Across TCGA patient cohorts, LMX1A RNA expression is significantly associated with the RNA expression of many other genes, with 9,835 significant associations in total. TGCT shows the largest number of these associations.

The most reproducible LMX1A-associated genes across cancer lineages are RAMP2-AS1, ZNF423, and PKDCC. Each is linked with LMX1A in more than 14 cancer types. Because this analysis shows association rather than direction, both LMX1A-to-partner and partner-to-LMX1A results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LMX1A versus RAMP2-AS1 in UCS, with a Pearson correlation of 0.47.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LMX1A→partner) and Y-score (partner→LMX1A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCS	RAMP2-AS1 →	+1.440	+1.335	<.001	<.001	3	15
SARC	ZNF423 →	+1.998	+1.396	<.001	<.001	3	14
UCS	PKDCC →	+1.551	+0.747	.004	.005	1	15
LUSC	TUB →	+1.052	+0.283	<.001	<.001	3	13
TGCT	SLC29A4 →	+1.067	+0.827	<.001	<.001	3	13
TGCT	GDF10 →	+1.370	+0.854	<.001	<.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,835 associations by consensus.

LMX1A vs RAMP2-AS1 — UCS

Explore this scatter interactively →