LMOD1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LMOD1 protein abundance is significantly associated with the RNA expression of many other genes, with 15,124 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LMOD1-associated genes across cancer lineages are CXCL12, CNN1, and SYNPO2. Each is linked with LMOD1 in more than 9 cancer types. Because this analysis shows association rather than direction, both LMOD1-to-partner and partner-to-LMOD1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LMOD1 versus CXCL12 in OV, with a Pearson correlation of 0.62.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LMOD1→partner) and Y-score (partner→LMOD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVCXCL12 →+1.516+0.648<.001<.001310
UCECCNN1 →+2.763+1.244<.001<.001310
HNSCSYNPO2 →+1.649+0.550<.001<.001310
BRCAMSRB3 →+1.461+0.876<.001<.001310
OVACTA2-AS1 →+1.732+0.743<.001<.001310
OVIRAG1 →+1.349+0.622<.001<.001310
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,124 associations by consensus.

LMOD1 vs CXCL12 — OV

Per-sample scatter of LMOD1 vs CXCL12 in OV (Pearson r = 0.62).

Explore this scatter interactively →

Exploration