Across TCGA patient cohorts, LMNTD2 mutation is significantly associated with the RNA expression of many other genes, with 2,691 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LMNTD2-associated genes across cancer lineages are RNU6-142P, RNU6-3P, and RNU6-855P. Each is linked with LMNTD2 in more than 2 cancer types. Because this analysis shows association rather than direction, both LMNTD2-to-partner and partner-to-LMNTD2 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LMNTD2→partner) and Y-score (partner→LMNTD2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	RNU6-142P →	+1.128	+5.132	<.001	<.001	3	3
COAD	RNU6-3P →	+1.304	+3.495	<.001	.002	3	3
COAD	RNU6-855P →	+1.010	+4.278	<.001	.001	3	3
COAD	RNU2-37P →	+0.790	+3.364	<.001	.003	3	3
COAD	RN7SL570P →	+0.588	+4.821	<.001	.003	3	3
COAD	MTCO1P55 →	+0.474	+3.067	<.001	.008	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,691 associations by consensus.

Exploration

LMNTD2 survival (RNA) · tumor vs normal (RNA) · all LMNTD2 data types