LMF1-AS1

Across TCGA patient cohorts, LMF1-AS1 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,114 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible LMF1-AS1-associated GO terms across cancer lineages are Mesenchyme morphogenesis, Regulation of cell-substrate junction organization, and Neuron projection extension. Each is linked with LMF1-AS1 in more than 25 cancer types. Because this analysis shows association rather than direction, both LMF1-AS1-to-partner and partner-to-LMF1-AS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Mesenchyme morphogenesis grouped by LMF1-AS1-low versus LMF1-AS1-high in TGCT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LMF1-AS1→partner) and Y-score (partner→LMF1-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
TGCT	Mesenchyme morphogenesis →	+0.057	+0.175	<.001	<.001	3	25
PAAD	Regulation of cell-substrate junction organization →	+0.067	+0.265	<.001	.001	3	25
ESCA	Neuron projection extension →	+0.050	+0.188	<.001	<.001	3	25
UVM	Retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum →	+0.046	+0.139	<.001	<.001	3	25
ESCA	Response to transforming growth factor beta →	+0.073	+0.223	<.001	<.001	3	25
STAD	Heart valve development →	+0.069	+0.161	<.001	.002	3	25

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,114 associations by consensus.

Mesenchyme morphogenesis by LMF1-AS1 expression — TGCT

Explore this box plot interactively →