LLPH-DT

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LLPH-DT RNA expression is significantly associated with the protein abundance of many other proteins, with 7,214 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LLPH-DT-associated proteins across cancer lineages are CYBA, ORC5, and HNRNPK. Each is linked with LLPH-DT in more than 3 cancer types. Because this analysis shows association rather than direction, both LLPH-DT-to-partner and partner-to-LLPH-DT results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LLPH-DT versus CYBA in UCEC, with a Pearson correlation of -0.35.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LLPH-DT→partner) and Y-score (partner→LLPH-DT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCYBA →-0.510-0.508.002.00834
GBMORC5 →+0.334+0.644.001.00134
GBMHNRNPK →+0.234+0.660.002<.00134
GBMKDM3B →+0.268+0.635<.001.00134
GBMPFKP_S783 →-0.596-0.763<.001<.00133
OVVPS13C_S737 →-0.640-0.623.002.00933
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,214 associations by consensus.

LLPH-DT vs CYBA — UCEC

Per-sample scatter of LLPH-DT vs CYBA in UCEC (Pearson r = -0.35).

Explore this scatter interactively →

Exploration