LIPC

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LIPC RNA expression is significantly associated with the protein abundance of many other proteins, with 8,984 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LIPC-associated proteins across cancer lineages are STRBP, SGCD, and MTPAP. Each is linked with LIPC in more than 3 cancer types. Because this analysis shows association rather than direction, both LIPC-to-partner and partner-to-LIPC results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LIPC versus STRBP in LSCC, with a Pearson correlation of -0.30.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LIPC→partner) and Y-score (partner→LIPC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCSTRBP →-0.597-0.296<.001.00134
BRCASGCD →+0.838+0.256<.001<.00134
BRCAMTPAP →-0.350-0.215<.001<.00133
BRCANACC1 →-0.229-0.225<.001<.00133
LSCCNCAPD2 →-0.488-0.294<.001<.00133
OVNCAPG →-0.406-0.461.001.00333
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,984 associations by consensus.

LIPC vs STRBP — LSCC

Per-sample scatter of LIPC vs STRBP in LSCC (Pearson r = -0.30).

Explore this scatter interactively →

Exploration