LINC02653

Across TCGA patient cohorts, LINC02653 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,452 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02653-associated GO terms across cancer lineages are Response to acid chemical, Chaperone cofactor-dependent protein refolding, and Organelle disassembly. Each is linked with LINC02653 in more than 7 cancer types. Because this analysis shows association rather than direction, both LINC02653-to-partner and partner-to-LINC02653 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Response to acid chemical grouped by LINC02653-low versus LINC02653-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02653→partner) and Y-score (partner→LINC02653) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Response to acid chemical →	+0.095	+0.094	<.001	<.001	3	8
STAD	Chaperone cofactor-dependent protein refolding →	+0.111	+0.051	<.001	<.001	3	8
STAD	Organelle disassembly →	+0.118	+0.045	<.001	<.001	3	7
STAD	Regulation of cytoplasmic translation →	+0.101	+0.045	<.001	<.001	3	7
STAD	Cerebral cortex cell migration →	+0.072	+0.044	<.001	<.001	3	7
STAD	Steroid hormone mediated signaling pathway →	+0.105	+0.091	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,452 associations by consensus.

Response to acid chemical by LINC02653 expression — STAD

Explore this box plot interactively →