LINC02643

Across TCGA patient cohorts, LINC02643 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,903 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02643-associated GO terms across cancer lineages are Positive regulation of stress fiber assembly, Microtubule cytoskeleton organization involved in mitosis, and Obsolete histone modification. Each is linked with LINC02643 in more than 9 cancer types. Because this analysis shows association rather than direction, both LINC02643-to-partner and partner-to-LINC02643 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of stress fiber assembly grouped by LINC02643-low versus LINC02643-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02643→partner) and Y-score (partner→LINC02643) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Positive regulation of stress fiber assembly →	+0.076	+0.248	<.001	<.001	3	10
STAD	Microtubule cytoskeleton organization involved in mitosis →	+0.071	+0.244	<.001	<.001	3	10
STAD	Obsolete histone modification →	+0.072	+0.280	<.001	<.001	3	10
STAD	Cell cycle G1/S phase transition →	+0.070	+0.330	<.001	<.001	3	10
STAD	Regulation of proteasomal ubiquitin-dependent protein catabolic process →	+0.078	+0.282	<.001	<.001	3	9
STAD	Osteoblast differentiation →	+0.065	+0.271	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,903 associations by consensus.

Positive regulation of stress fiber assembly by LINC02643 expression — STAD

Explore this box plot interactively →