LINC02643

Across TCGA pan-cancer cohorts, LINC02643 RNA is linked to patient survival in 14 of 34 cancer types, making it the most broadly survival-associated LINC02643 data layer.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where higher LINC02643 RNA is associated with worse overall survival. In most high-consensus cancer types, elevated LINC02643 expression acts as an unfavorable survival marker, although some lineages such as UCS and SKCM show a favorable association.

HNSC, ACC, and UCEC are the cancer types where LINC02643 RNA most reproducibly stratifies survival.

RNA survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.

Lineage	Measure	Split	Stage	AUC1 high	AUC2 low	p	Sampling consensus
HNSC	OS	Median	All	0.260	0.440	<.001	168	view →
ACC	OS	Tertile	All	0.269	0.755	<.001	155	view →
UCEC	DFS	Tertile	All	0.369	0.676	<.001	72	view →
DLBC	OS	Tertile	III,IV	0.275	0.965	<.001	63	view →
CHOL	OS	Tertile	All	0.422	0.751	.009	45	view →
KIRP	OS	Tertile	All	0.311	0.739	<.001	30	view →
READ	DFS	Tertile	All	0.182	0.798	.010	27	view →
UCS	DFS	Quartile	III,IV	0.656	0.140	.013	26	view →
SKCM	OS	Tertile	III,IV	0.879	0.785	.023	26	view →
TGCT	DFS	Quartile	All	0.590	0.869	<.001	18	view →
OV	OS	Tertile	IV	0.793	0.450	.004	14	view →
SARC	DFS	Tertile	All	0.177	0.431	.024	12	view →

Pink = unfavorable, green = favorable. Showing the 12 strongest of 14 lineages.

LINC02643–HNSC (OS)

Open the HNSC breakdown →