LINC02583

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC02583 mutation is significantly associated with the RNA expression of many other genes, with 23 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC02583-associated genes across cancer lineages are LINC01954, CMC4, and SPANXN3. Each is linked with LINC02583 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC02583-to-partner and partner-to-LINC02583 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02583→partner) and Y-score (partner→LINC02583) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECLINC01954 →+0.389+3.891.001.00231
UCECCMC4 →+0.034+3.294<.001.00731
UCECSPANXN3 →+0.260+3.638<.001.00131
UCECRNU6-1318P →+0.309+3.621.007.00431
UCECRNU6-891P →+0.506+3.193<.001.00431
UCECRNU6-39P →+0.412+3.077.008.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 23 associations by consensus.

Exploration