LINC02428

Across TCGA patient cohorts, LINC02428 RNA expression is significantly associated with the RNA expression of many other genes, with 10,123 significant associations in total. TGCT shows the largest number of these associations.

The most reproducible LINC02428-associated genes across cancer lineages are LINC02163, LINC01980, and LINC02820. Each is linked with LINC02428 in more than 22 cancer types. Because this analysis shows association rather than direction, both LINC02428-to-partner and partner-to-LINC02428 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02428 versus LINC02163 in THYM, with a Pearson correlation of 0.43.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02428→partner) and Y-score (partner→LINC02428) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
THYM	LINC02163 →	+1.693	+0.729	<.001	<.001	3	23
ESCA	LINC01980 →	+2.786	+1.907	<.001	<.001	3	22
OV	LINC02820 →	+1.993	+1.275	<.001	<.001	3	21
ESCA	G2E3-AS1 →	+1.567	+1.580	<.001	<.001	3	20
SKCM	MAGEA1 →	+1.873	+0.560	<.001	<.001	3	20
THYM	LINC02466 →	+0.726	+0.739	<.001	<.001	3	20

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,123 associations by consensus.

LINC02428 vs LINC02163 — THYM

Explore this scatter interactively →