LINC02349

Across TCGA patient cohorts, LINC02349 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,822 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02349-associated GO terms across cancer lineages are Actin polymerization or depolymerization, Regulation of cell morphogenesis, and Regulation of protein serine/threonine kinase activity. Each is linked with LINC02349 in more than 9 cancer types. Because this analysis shows association rather than direction, both LINC02349-to-partner and partner-to-LINC02349 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Actin polymerization or depolymerization grouped by LINC02349-low versus LINC02349-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02349→partner) and Y-score (partner→LINC02349) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Actin polymerization or depolymerization →	+0.096	+0.051	<.001	.004	3	10
ESCA	Regulation of cell morphogenesis →	+0.092	+0.050	<.001	.004	3	10
ESCA	Regulation of protein serine/threonine kinase activity →	+0.105	+0.081	<.001	.001	2	10
ESCA	Cellular respiration →	+0.118	+0.057	<.001	.001	3	9
STAD	Nucleoside triphosphate biosynthetic process →	+0.119	+0.061	<.001	<.001	3	9
ESCA	Regulation of actin filament organization →	+0.105	+0.094	<.001	.004	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,822 associations by consensus.

Actin polymerization or depolymerization by LINC02349 expression — ESCA

Explore this box plot interactively →