LINC02246

Across TCGA patient cohorts, LINC02246 RNA expression is significantly associated with the RNA expression of many other genes, with 18,601 significant associations in total. UVM shows the largest number of these associations.

The most reproducible LINC02246-associated genes across cancer lineages are NRIP1, RAB3GAP2, and HSPA13. Each is linked with LINC02246 in more than 32 cancer types. Because this analysis shows association rather than direction, both LINC02246-to-partner and partner-to-LINC02246 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02246 versus NRIP1 in LAML, with a Pearson correlation of 0.82.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02246→partner) and Y-score (partner→LINC02246) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LAML	NRIP1 →	+1.979	+0.696	<.001	<.001	3	33
UVM	RAB3GAP2 →	+1.482	+0.079	<.001	<.001	3	31
UVM	HSPA13 →	+1.567	+0.085	<.001	<.001	3	31
UVM	BACH1 →	+1.199	+0.078	<.001	<.001	3	31
UVM	ANKIB1 →	+1.396	+0.086	<.001	<.001	3	31
UVM	LTN1 →	+1.301	+0.078	<.001	<.001	3	30

Each partner links to its Q-omics profile. Showing the 6 strongest of 18,601 associations by consensus.

LINC02246 vs NRIP1 — LAML

Explore this scatter interactively →