LINC02209

Across TCGA patient cohorts, LINC02209 RNA expression is significantly associated with the protein abundance of many other proteins, with 3,474 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible LINC02209-associated proteins across cancer lineages are CCNT1, EXOSC6, and GPT2. Each is linked with LINC02209 in more than 2 cancer types. Because this analysis shows association rather than direction, both LINC02209-to-partner and partner-to-LINC02209 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02209 versus CCNT1 in COAD, with a Pearson correlation of 0.31.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02209→partner) and Y-score (partner→LINC02209) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	CCNT1 →	+0.425	+0.005	.002	.009	3	2
COAD	EXOSC6 →	+0.263	+0.005	.003	.009	3	2
LUAD	GPT2 →	+0.613	+0.080	<.001	.005	3	2
LUAD	NDC80 →	+0.563	+0.104	.001	.009	3	2
GBM	NEK9_S829 →	-0.411	-0.034	.004	.007	2	3
LUAD	NFRKB_S228 →	+0.688	+0.105	<.001	<.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,474 associations by consensus.

LINC02209 vs CCNT1 — COAD

Explore this scatter interactively →