LINC02109

Across TCGA patient cohorts, LINC02109 RNA expression is significantly associated with the RNA expression of many other genes, with 5,249 significant associations in total. THYM shows the largest number of these associations.

The most reproducible LINC02109-associated genes across cancer lineages are LINC01980, LINC02466, and LINC02163. Each is linked with LINC02109 in more than 19 cancer types. Because this analysis shows association rather than direction, both LINC02109-to-partner and partner-to-LINC02109 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02109 versus LINC01980 in THYM, with a Pearson correlation of 0.50.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02109→partner) and Y-score (partner→LINC02109) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
THYM	LINC01980 →	+2.362	+0.374	<.001	<.001	3	20
THYM	LINC02466 →	+0.520	+0.313	<.001	<.001	3	19
THYM	LINC02163 →	+1.584	+0.435	<.001	<.001	3	18
SKCM	MAGEA6 →	+2.630	+0.372	<.001	<.001	3	17
SKCM	LINC01194 →	+1.014	+0.416	<.001	<.001	3	17
HNSC	LINC02428 →	+0.873	+0.156	<.001	<.001	3	17

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,249 associations by consensus.

LINC02109 vs LINC01980 — THYM

Explore this scatter interactively →