LINC01974

Across TCGA patient cohorts, LINC01974 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,133 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01974-associated GO terms across cancer lineages are Regulation of transcription elongation by RNA polymerase II, DNA-templated transcription elongation, and Protein methylation. Each is linked with LINC01974 in more than 10 cancer types. Because this analysis shows association rather than direction, both LINC01974-to-partner and partner-to-LINC01974 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of transcription elongation by RNA polymerase II grouped by LINC01974-low versus LINC01974-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01974→partner) and Y-score (partner→LINC01974) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of transcription elongation by RNA polymerase II →	+0.092	+0.101	<.001	<.001	3	11
STAD	DNA-templated transcription elongation →	+0.096	+0.109	<.001	<.001	3	10
STAD	Protein methylation →	+0.079	+0.098	<.001	<.001	3	10
STAD	Ribose phosphate biosynthetic process →	+0.085	+0.103	<.001	<.001	3	9
STAD	Negative regulation of mRNA processing →	+0.088	+0.134	<.001	<.001	3	9
STAD	Peptidyl-lysine modification →	+0.084	+0.122	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,133 associations by consensus.

Regulation of transcription elongation by RNA polymerase II by LINC01974 expression — STAD

Explore this box plot interactively →