LINC01945

Across TCGA patient cohorts, LINC01945 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,562 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01945-associated GO terms across cancer lineages are Protein polymerization, Regulation of organelle assembly, and Negative regulation of protein localization. Each is linked with LINC01945 in more than 11 cancer types. Because this analysis shows association rather than direction, both LINC01945-to-partner and partner-to-LINC01945 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein polymerization grouped by LINC01945-low versus LINC01945-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01945→partner) and Y-score (partner→LINC01945) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Protein polymerization →	+0.044	+0.103	<.001	<.001	3	12
STAD	Regulation of organelle assembly →	+0.061	+0.117	<.001	<.001	3	11
STAD	Negative regulation of protein localization →	+0.044	+0.122	<.001	<.001	3	10
ESCA	Regulation of microtubule polymerization or depolymerization →	+0.047	+0.134	.001	<.001	3	10
STAD	TOR signaling →	+0.046	+0.107	<.001	<.001	3	10
STAD	Developmental cell growth →	+0.037	+0.089	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,562 associations by consensus.

Protein polymerization by LINC01945 expression — STAD

Explore this box plot interactively →