LINC01890

Across TCGA patient cohorts, LINC01890 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,347 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC01890-associated proteins across cancer lineages are MYO1F, ARHGAP25, and THEMIS2_T593. Each is linked with LINC01890 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC01890-to-partner and partner-to-LINC01890 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01890 versus MYO1F in GBM, with a Pearson correlation of 0.35.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01890→partner) and Y-score (partner→LINC01890) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	MYO1F →	+0.655	+0.148	<.001	.002	3	5
GBM	ARHGAP25 →	+0.499	+0.179	<.001	<.001	3	5
HNSC	THEMIS2_T593 →	+0.621	+0.168	<.001	.003	3	5
GBM	AIF1 →	+0.476	+0.114	<.001	<.001	3	5
CCRCC	WAS →	+0.419	+0.288	<.001	<.001	3	5
GBM	DOCK2_S1685 →	+0.662	+0.162	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,347 associations by consensus.

LINC01890 vs MYO1F — GBM

Explore this scatter interactively →