LINC01890

Across TCGA patient cohorts, LINC01890 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,539 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01890-associated GO terms across cancer lineages are Lymphocyte activation involved in immune response, B cell activation, and Regulation of lymphocyte differentiation. Each is linked with LINC01890 in more than 17 cancer types. Because this analysis shows association rather than direction, both LINC01890-to-partner and partner-to-LINC01890 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Lymphocyte activation involved in immune response grouped by LINC01890-low versus LINC01890-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01890→partner) and Y-score (partner→LINC01890) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Lymphocyte activation involved in immune response →	+0.056	+0.086	<.001	<.001	3	18
STAD	B cell activation →	+0.063	+0.084	<.001	<.001	3	18
STAD	Regulation of lymphocyte differentiation →	+0.059	+0.079	<.001	<.001	3	17
STAD	Canonical NF-kappaB signal transduction →	+0.058	+0.079	<.001	<.001	3	17
STAD	Alpha-beta T cell differentiation →	+0.056	+0.080	<.001	<.001	3	16
STAD	Phagocytosis →	+0.055	+0.074	<.001	<.001	3	16

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,539 associations by consensus.

Lymphocyte activation involved in immune response by LINC01890 expression — STAD

Explore this box plot interactively →