LINC01888

Across TCGA patient cohorts, LINC01888 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,715 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01888-associated GO terms across cancer lineages are B cell differentiation, Myeloid leukocyte migration, and Regulation of leukocyte proliferation. Each is linked with LINC01888 in more than 23 cancer types. Because this analysis shows association rather than direction, both LINC01888-to-partner and partner-to-LINC01888 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, B cell differentiation grouped by LINC01888-low versus LINC01888-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01888→partner) and Y-score (partner→LINC01888) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	B cell differentiation →	+0.056	+0.124	<.001	<.001	3	24
ESCA	Myeloid leukocyte migration →	+0.048	+0.076	<.001	<.001	3	23
ESCA	Regulation of leukocyte proliferation →	+0.049	+0.069	<.001	<.001	3	23
STAD	Interleukin-12 production →	+0.051	+0.132	<.001	<.001	3	23
STAD	B cell activation →	+0.056	+0.130	<.001	<.001	3	23
ESCA	Granulocyte migration →	+0.049	+0.076	<.001	<.001	3	22

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,715 associations by consensus.

B cell differentiation by LINC01888 expression — STAD

Explore this box plot interactively →