LINC01777

Across TCGA patient cohorts, LINC01777 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,378 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01777-associated GO terms across cancer lineages are Negative regulation of cell development, Base-excision repair, and Recombinational repair. Each is linked with LINC01777 in more than 9 cancer types. Because this analysis shows association rather than direction, both LINC01777-to-partner and partner-to-LINC01777 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of cell development grouped by LINC01777-low versus LINC01777-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01777→partner) and Y-score (partner→LINC01777) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Negative regulation of cell development →	+0.047	+0.033	<.001	.003	3	10
STAD	Base-excision repair →	+0.073	+0.046	<.001	<.001	3	9
STAD	Recombinational repair →	+0.059	+0.034	<.001	<.001	3	9
STAD	Regulation of transcription elongation by RNA polymerase II →	+0.071	+0.038	<.001	<.001	3	9
ESCA	Mesenchymal cell differentiation →	+0.060	+0.056	<.001	.001	3	9
STAD	Positive regulation of DNA metabolic process →	+0.071	+0.044	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,378 associations by consensus.

Negative regulation of cell development by LINC01777 expression — ESCA

Explore this box plot interactively →