LINC01749

Across TCGA patient cohorts, LINC01749 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,489 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible LINC01749-associated GO terms across cancer lineages are Recombinational repair, Regulation of protein ubiquitination, and Signal transduction in response to DNA damage. Each is linked with LINC01749 in more than 10 cancer types. Because this analysis shows association rather than direction, both LINC01749-to-partner and partner-to-LINC01749 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Recombinational repair grouped by LINC01749-low versus LINC01749-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01749→partner) and Y-score (partner→LINC01749) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Recombinational repair →	+0.050	+0.165	<.001	<.001	3	11
STAD	Regulation of protein ubiquitination →	+0.074	+0.224	<.001	<.001	3	11
STAD	Signal transduction in response to DNA damage →	+0.049	+0.145	<.001	<.001	3	11
STAD	Positive regulation of stem cell population maintenance →	+0.071	+0.195	<.001	.001	3	10
STAD	Positive regulation of protein modification by small protein conjugation or removal →	+0.045	+0.117	<.001	.003	3	10
STAD	Positive regulation of telomerase RNA localization to Cajal body →	+0.074	+0.179	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,489 associations by consensus.

Recombinational repair by LINC01749 expression — STAD

Explore this box plot interactively →