LINC01749

Across TCGA patient cohorts, LINC01749 mutation is significantly associated with the RNA expression of many other genes, with 3 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC01749-associated genes across cancer lineages are RNU6-992P, IGHD1-26, and MIR3692. Each is linked with LINC01749 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC01749-to-partner and partner-to-LINC01749 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-992P grouped by LINC01749-low versus LINC01749-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01749→partner) and Y-score (partner→LINC01749) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	RNU6-992P →	+0.385	+5.877	<.001	.001	3	1
UCEC	IGHD1-26 →	+1.260	+4.484	<.001	.009	3	1
UCEC	MIR3692 →	+0.530	+5.877	.001	.001	3	1

Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

RNU6-992P by LINC01749 expression — UCEC

Explore this box plot interactively →