LINC01727

Across TCGA patient cohorts, LINC01727 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,502 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC01727-associated proteins across cancer lineages are SAMHD1, SEPTIN1_S315, and BTK. Each is linked with LINC01727 in more than 6 cancer types. Because this analysis shows association rather than direction, both LINC01727-to-partner and partner-to-LINC01727 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01727 versus SAMHD1 in HNSC, with a Pearson correlation of 0.21.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01727→partner) and Y-score (partner→LINC01727) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	SAMHD1 →	+0.659	+0.411	<.001	.005	3	7
LUAD	SEPTIN1_S315 →	+0.973	+0.159	<.001	<.001	3	7
HNSC	BTK →	+0.537	+0.313	<.001	.003	3	7
LSCC	CD4 →	+0.642	+0.192	<.001	<.001	3	7
BRCA	CORO1A →	+0.546	+0.059	<.001	<.001	3	7
LSCC	COTL1 →	+0.438	+0.197	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,502 associations by consensus.

LINC01727 vs SAMHD1 — HNSC

Explore this scatter interactively →