LINC01687

Across TCGA patient cohorts, LINC01687 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,354 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01687-associated GO terms across cancer lineages are Negative regulation of DNA metabolic process, Protein localization to nuclear envelope, and Positive regulation of cell cycle process. Each is linked with LINC01687 in more than 16 cancer types. Because this analysis shows association rather than direction, both LINC01687-to-partner and partner-to-LINC01687 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of DNA metabolic process grouped by LINC01687-low versus LINC01687-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01687→partner) and Y-score (partner→LINC01687) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Negative regulation of DNA metabolic process →	+0.051	+0.121	<.001	<.001	3	17
STAD	Protein localization to nuclear envelope →	+0.086	+0.207	<.001	<.001	3	16
STAD	Positive regulation of cell cycle process →	+0.060	+0.148	<.001	<.001	3	16
STAD	Mitotic nuclear division →	+0.072	+0.144	<.001	<.001	3	16
STAD	Negative regulation of DNA repair →	+0.052	+0.124	<.001	<.001	3	16
STAD	Negative regulation of chromosome organization →	+0.067	+0.131	<.001	<.001	3	16

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,354 associations by consensus.

Negative regulation of DNA metabolic process by LINC01687 expression — STAD

Explore this box plot interactively →