LINC01666

Across TCGA patient cohorts, LINC01666 RNA expression is significantly associated with the RNA expression of many other genes, with 9,160 significant associations in total. THYM shows the largest number of these associations.

The most reproducible LINC01666-associated genes across cancer lineages are FRG1JP, MAGEC2, and BAGE2. Each is linked with LINC01666 in more than 18 cancer types. Because this analysis shows association rather than direction, both LINC01666-to-partner and partner-to-LINC01666 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01666 versus FRG1JP in SKCM, with a Pearson correlation of 0.35.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01666→partner) and Y-score (partner→LINC01666) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	FRG1JP →	+0.989	+0.504	<.001	<.001	3	19
SKCM	MAGEC2 →	+3.105	+0.711	<.001	<.001	3	19
SKCM	BAGE2 →	+1.023	+0.875	<.001	<.001	3	18
SKCM	MAGEA6 →	+3.036	+0.831	<.001	<.001	3	17
UCS	LINC02335 →	+1.299	+0.731	.001	<.001	3	17
LIHC	ASNSP1 →	+0.665	+0.494	<.001	<.001	3	17

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,160 associations by consensus.

LINC01666 vs FRG1JP — SKCM

Explore this scatter interactively →