LINC01563

Across TCGA patient cohorts, LINC01563 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,645 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible LINC01563-associated proteins across cancer lineages are PPP1R12B, PRKG1, and OLFML1. Each is linked with LINC01563 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC01563-to-partner and partner-to-LINC01563 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01563 versus PPP1R12B in HNSC, with a Pearson correlation of 0.25.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01563→partner) and Y-score (partner→LINC01563) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	PPP1R12B →	+0.651	+0.319	<.001	<.001	3	4
PDAC	PRKG1 →	+0.493	+0.206	<.001	<.001	3	4
CCRCC	OLFML1 →	+0.932	+0.080	<.001	.003	3	4
BRCA	SFRP1 →	+0.763	+0.166	<.001	.001	3	4
CCRCC	BAG2 →	+0.614	+0.099	<.001	<.001	3	4
CCRCC	THBS3 →	+0.703	+0.093	<.001	.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,645 associations by consensus.

LINC01563 vs PPP1R12B — HNSC

Explore this scatter interactively →