LINC01490

Across TCGA patient cohorts, LINC01490 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,660 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01490-associated GO terms across cancer lineages are Regulation of protein serine/threonine kinase activity, Regulation of polysaccharide biosynthetic process, and Obsolete ER-associated misfolded protein catabolic process. Each is linked with LINC01490 in more than 9 cancer types. Because this analysis shows association rather than direction, both LINC01490-to-partner and partner-to-LINC01490 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of protein serine/threonine kinase activity grouped by LINC01490-low versus LINC01490-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01490→partner) and Y-score (partner→LINC01490) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of protein serine/threonine kinase activity →	+0.071	+0.214	<.001	<.001	3	10
STAD	Regulation of polysaccharide biosynthetic process →	+0.069	+0.172	<.001	<.001	3	9
STAD	Obsolete ER-associated misfolded protein catabolic process →	+0.071	+0.215	<.001	<.001	3	9
STAD	Negative regulation of chromosome organization →	+0.081	+0.198	<.001	<.001	3	9
STAD	Vesicle localization →	+0.073	+0.215	<.001	<.001	3	9
STAD	Protein autoubiquitination →	+0.080	+0.217	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,660 associations by consensus.

Regulation of protein serine/threonine kinase activity by LINC01490 expression — STAD

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