LINC01490

associated omics data
long intergenic non-protein coding RNA 1490Genealiases: []

Q-omics provides the consensus-scored LINC01490 profile across patient tissues and cancer cell-line models. LINC01490 expression is associated with patient survival in 12 of 34 cancer types, with the highest sampling consensus in COAD. Among the 18 cancer types available for tumor–normal comparison, LINC01490 is differentially expressed in 2, with the highest sampling consensus in KICH. Additionally, LINC01490 RNA expression shows 9,156 significant gene co-expression associations, with the highest sampling consensus in COAD. Together, these results highlight COAD, and KICH as cancer lineages where LINC01490 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes LINC01490 survival associations across molecular data types. LINC01490 RNA expression shows survival associations in the most cancer types (12). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
LINC01490 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier12COAD (99)view →
This table ranks reproducible LINC01490 RNA expression–survival associations across cancer types. High LINC01490 expression shows unfavorable associations in COAD, LUAD, BLCA, SKCM and LGG, but favorable associations in UCS. The COAD Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify COAD as the clearest survival context for LINC01490 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
COADOSTertileIII,IV0.0890.788<.00199view →
LUADOSTertileIII,IV0.0830.670<.00190view →
UCSDFSTertileII,III,IV0.7200.302.00358view →
BLCAOSTertileIV0.0820.590<.00145view →
SKCMDFSTertileAll0.4170.772<.00127view →
LGGDFSTertileAll0.6440.845<.00121view →
Pink = unfavorable, green = favorable. all 12 lineages →

LINC01490-COAD (OS)

Kaplan–Meier survival curve for LINC01490 RNA expression in COAD: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes LINC01490 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 2. The strongest signals are observed in KICH for RNA.
LINC01490 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot2KICH (5)view →
This table ranks reproducible tumor–normal expression differences for LINC01490. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. LINC01490 shows lower tumor expression in THCA and higher tumor expression in KICH. The KICH box plot shows higher LINC01490 RNA expression in tumor versus normal tissue (log2 FC = +0.056, t-test p = .001).
LineageGenderStageFold-changepSampling consensus
KICHAllAll+0.056.0015view →
THCAAllAll−0.007.0362view →
Green = repressed in tumor. all 2 lineages →

LINC01490-KICH

Tumor-vs-normal expression box plot for LINC01490 in KICH.

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Cross-omics associations

This table shows molecular features associated with LINC01490 in patient tissues and cancer cell lines. In patient samples, LINC01490 shows the broadest associations at the RNA and protein expression levels, with COAD recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA9,156COAD (2588)view →
Function (RNA)6,660STAD (6082)view →