LINC01397

Across TCGA patient cohorts, LINC01397 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,082 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01397-associated GO terms across cancer lineages are Regulation of post-translational protein modification, Positive regulation of post-translational protein modification, and Positive regulation of ubiquitin-dependent protein catabolic process. Each is linked with LINC01397 in more than 25 cancer types. Because this analysis shows association rather than direction, both LINC01397-to-partner and partner-to-LINC01397 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of post-translational protein modification grouped by LINC01397-low versus LINC01397-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01397→partner) and Y-score (partner→LINC01397) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of post-translational protein modification →	+0.066	+0.377	<.001	<.001	3	26
STAD	Positive regulation of post-translational protein modification →	+0.064	+0.413	<.001	<.001	3	26
STAD	Positive regulation of ubiquitin-dependent protein catabolic process →	+0.059	+0.382	<.001	<.001	3	25
STAD	Positive regulation of chromosome organization →	+0.068	+0.371	<.001	<.001	3	25
STAD	Nucleus organization →	+0.063	+0.421	<.001	<.001	3	25
STAD	Telomere maintenance →	+0.063	+0.380	<.001	<.001	3	25

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,082 associations by consensus.

Regulation of post-translational protein modification by LINC01397 expression — STAD

Explore this box plot interactively →