LINC01397

Across TCGA pan-cancer cohorts, LINC01397 RNA is linked to patient survival in 22 of 34 cancer types, making it the most broadly survival-associated LINC01397 data layer.

The strongest signal is observed in kidney renal papillary cell carcinoma (KIRP), where higher LINC01397 RNA is associated with worse overall survival. In most high-consensus cancer types, elevated LINC01397 expression acts as an unfavorable survival marker, although some lineages such as SKCM and UCS show a favorable association.

KIRP, KIRC, and ACC are the cancer types where LINC01397 RNA most reproducibly stratifies survival.

RNA survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.

Lineage	Measure	Split	Stage	AUC1 high	AUC2 low	p	Sampling consensus
KIRP	OS	Tertile	All	0.486	0.774	<.001	133	view →
KIRC	DFS	Median	All	0.523	0.714	<.001	112	view →
ACC	DFS	Quartile	All	0.411	0.738	<.001	80	view →
LGG	DFS	Tertile	All	0.311	0.595	<.001	28	view →
PAAD	OS	Quartile	II,III,IV	0.266	0.445	.016	21	view →
THYM	DFS	Quartile	All	0.720	0.971	.004	20	view →
PRAD	DFS	Median	All	0.828	0.930	<.001	16	view →
OV	OS	Quartile	All	0.801	0.855	.026	16	view →
SKCM	OS	Quartile	IV	0.787	0.217	.003	15	view →
UCS	DFS	Tertile	All	0.621	0.277	.009	14	view →
COAD	DFS	Quartile	All	0.664	0.812	.006	13	view →
BLCA	DFS	Median	III,IV	0.419	0.225	.013	13	view →

Pink = unfavorable, green = favorable. Showing the 12 strongest of 22 lineages.

LINC01397–KIRP (OS)

Open the KIRP breakdown →