LINC01374

Across TCGA patient cohorts, LINC01374 RNA expression is significantly associated with the protein abundance of many other proteins, with 16,069 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC01374-associated proteins across cancer lineages are KCTD12, SMC2, and SMC4. Each is linked with LINC01374 in more than 6 cancer types. Because this analysis shows association rather than direction, both LINC01374-to-partner and partner-to-LINC01374 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01374 versus KCTD12 in HNSC, with a Pearson correlation of 0.30.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01374→partner) and Y-score (partner→LINC01374) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	KCTD12 →	+0.366	+0.463	<.001	<.001	3	7
UCEC	SMC2 →	-0.571	-0.479	<.001	.002	3	6
BRCA	SMC4 →	-0.517	-0.264	<.001	<.001	3	6
HNSC	EVL →	+0.628	+0.469	<.001	<.001	3	6
BRCA	DARS1 →	-0.262	-0.299	<.001	<.001	3	6
LSCC	EZH2_T487 →	-0.532	-0.346	.002	.002	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,069 associations by consensus.

LINC01374 vs KCTD12 — HNSC

Explore this scatter interactively →