LINC01258

Across TCGA patient cohorts, LINC01258 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,031 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01258-associated GO terms across cancer lineages are Non-motile cilium assembly, Microtubule-based transport, and Smoothened signaling pathway. Each is linked with LINC01258 in more than 15 cancer types. Because this analysis shows association rather than direction, both LINC01258-to-partner and partner-to-LINC01258 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Non-motile cilium assembly grouped by LINC01258-low versus LINC01258-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01258→partner) and Y-score (partner→LINC01258) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Non-motile cilium assembly →	+0.043	+0.201	.001	.001	3	16
STAD	Microtubule-based transport →	+0.038	+0.095	<.001	<.001	3	14
ESCA	Smoothened signaling pathway →	+0.052	+0.207	<.001	.001	3	14
STAD	Lipoprotein metabolic process →	+0.049	+0.090	<.001	<.001	3	14
ESCA	Positive regulation of protein modification by small protein conjugation or removal →	+0.066	+0.243	.001	<.001	2	14
STAD	RNA 3'-end processing →	+0.053	+0.105	<.001	<.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,031 associations by consensus.

Non-motile cilium assembly by LINC01258 expression — ESCA

Explore this box plot interactively →