LINC01205

Across TCGA patient cohorts, LINC01205 mutation is significantly associated with the RNA expression of many other genes, with 2,432 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC01205-associated genes across cancer lineages are SNORD41, RN7SL472P, and RNU6-525P. Each is linked with LINC01205 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC01205-to-partner and partner-to-LINC01205 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SNORD41 grouped by LINC01205-low versus LINC01205-high in BRCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01205→partner) and Y-score (partner→LINC01205) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	SNORD41 →	+0.616	+4.232	<.001	.009	3	2
UCEC	RN7SL472P →	+0.339	+2.178	.009	.004	3	2
BRCA	RNU6-525P →	+0.280	+5.215	<.001	.003	3	1
BRCA	RNU6-374P →	+0.106	+7.473	<.001	.007	3	1
BRCA	RNU4-20P →	+0.092	+7.473	<.001	.007	3	1
BRCA	SRSF6P1 →	+0.083	+5.711	<.001	.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,432 associations by consensus.

SNORD41 by LINC01205 expression — BRCA

Explore this box plot interactively →