LINC01098

Across TCGA patient cohorts, LINC01098 mutation is significantly associated with the RNA expression of many other genes, with 1,371 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC01098-associated genes across cancer lineages are BMS1P13, RNU6-342P, and TPRKBP1. Each is linked with LINC01098 in more than 2 cancer types. Because this analysis shows association rather than direction, both LINC01098-to-partner and partner-to-LINC01098 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, BMS1P13 grouped by LINC01098-low versus LINC01098-high in LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01098→partner) and Y-score (partner→LINC01098) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUSC	BMS1P13 →	+0.049	+3.117	.001	.007	3	3
HNSC	RNU6-342P →	+0.378	+5.241	<.001	.007	3	2
UCEC	TPRKBP1 →	+0.219	+2.510	<.001	.001	3	2
UCEC	IMP3P2 →	+0.270	+2.007	<.001	.009	3	2
UCEC	MIR6857 →	+0.353	+3.037	<.001	.002	3	2
SKCM	LSM3P3 →	+0.195	+3.609	.003	.006	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,371 associations by consensus.

BMS1P13 by LINC01098 expression — LUSC

Explore this box plot interactively →