LINC00887

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC00887 mutation is significantly associated with the RNA expression of many other genes, with 12 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC00887-associated genes across cancer lineages are MIR4734, IGHV1OR15-4, and RNU6-1227P. Each is linked with LINC00887 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC00887-to-partner and partner-to-LINC00887 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00887→partner) and Y-score (partner→LINC00887) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMIR4734 →+0.518+3.809.002.00731
UCECIGHV1OR15-4 →+0.102+4.352.003.00831
UCECRNU6-1227P →+0.378+4.997<.001.00331
UCECMIR760 →+0.663+3.960.001.00731
UCECRARRES2P2 →+0.301+3.895<.001.00831
UCECRPS3AP33 →+0.080+4.109<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 12 associations by consensus.

Exploration